Efficient Counting and Asymptotics of k-Noncrossing Tangled Diagrams
نویسندگان
چکیده
In this paper we enumerate k-noncrossing tangled-diagrams. A tangled-diagram is a labeled graph whose vertices are 1, . . . , n have degree ≤ 2, and are arranged in increasing order in a horizontal line. Its arcs are drawn in the upper halfplane with a particular notion of crossings and nestings. Our main result is the asymptotic formula for the number of knoncrossing tangled-diagrams Tk(n) ∼ ck n −((k−1)+(k−1)/2) (4(k − 1)2 + 2(k − 1) + 1)n for some ck > 0. 1. Tangled diagrams as molecules or walks In this paper we show how to compute the numbers of k-noncrossing tangled-diagrams and prove the asymptotic formula (1.1) Tk(n) ∼ ck n −((k−1)+(k−1)/2) (4(k − 1) + 2(k − 1) + 1), ck > 0 . This article is accompanied by a Maple package TANGLE, downloadable from the webpage http : //www.math.rutgers.edu/ ̃zeilberg/mamarim/mamarimhtml/tangled.html . k-noncrossing tangled-diagrams are motivated by studies of RNA molecules. They serve as combinatorial frames for searching molecular configurations and were recently studied [5] by the first three authors. Tangled-diagrams are labeled graphs over the vertices 1, . . . , n, drawn in a horizontal line in increasing order. Their arcs are drawn in the upper halfplane having the following types Date: February, 2008.
منابع مشابه
ON k-NONCROSSING PARTITIONS
In this paper we prove a duality between k-noncrossing partitions over [n] = {1, . . . , n} and k-noncrossing braids over [n − 1]. This duality is derived directly via (generalized) vacillating tableaux which are in correspondence to tangled-diagrams [6]. We give a combinatorial interpretation of the bijection in terms of the contraction of arcs of tangled-diagrams. Furthermore it induces by re...
متن کاملA Combinatorial Framework for Rna Tertiary Interaction
In this paper we show how to express RNA tertiary interactions via the concepts of tangled diagrams. Tangled diagrams allow to formulate RNA base triples and pseudoknotinteractions and to control the maximum number of mutually crossing arcs. In particular we study two subsets of tangled diagrams: 3-noncrossing tangled-diagrams with l vertices of degree two and 2-regular, 3-noncrossing partition...
متن کاملCrossings and Nestings in Tangled Diagrams
A tangled-diagram over [n] = {1, . . . , n} is a graph of degree less than two whose vertices 1, . . . , n are arranged in a horizontal line and whose arcs are drawn in the upper halfplane with a particular notion of crossings and nestings. Generalizing the construction of Chen et.al. we prove a bijection between generalized vacillating tableaux with less than k rows and knoncrossing tangled-di...
متن کاملON 2-REGULAR, k-NONCROSSING PARTITIONS
In this paper we prove a bijection between 2-regular, k-noncrossing partitions and k-noncrossing enhanced partitions. Via this bijection we enumerate 2-regular, 3-noncrossing partitions using an enumeration result [1] for enhanced 3-noncrossing partitions. In addition we derive the asymptotics for the numbers of 2-regular, 3-noncrossing partitions using the BirkhoffTrijtzinky analytic theory of...
متن کاملModular, k-Noncrossing Diagrams
In this paper we compute the generating function of modular, k-noncrossing diagrams. A k-noncrossing diagram is called modular if it does not contain any isolated arcs and any arc has length at least four. Modular diagrams represent the deformation retracts of RNA tertiary structures and their properties reflect basic features of these bio-molecules. The particular case of modular noncrossing d...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Electr. J. Comb.
دوره 16 شماره
صفحات -
تاریخ انتشار 2009